 |
Wayne
Maddison
Professor and Canada Research Chair
Departments of Zoology
and Botany
Director, Beaty Biodiversity Museum
University of British Columbia
wmaddisn
[at] interchange.ubc.ca
+1-604-822-1545
David and Lucile Packard Fellow for Science and Engineering (1993-1998)
Associate and Assistant Professor, University of Arizona (1990-2003)
NSERC Postdoctoral Fellow, U. C. Berkeley (1988-1990)
PhD, Harvard University (1988)
BSc Zoology, University of Toronto (1980 |
My research arose from a fascination with the diversity of forms and behaviours
of jumping spiders, which led to systematics, which led to phylogenetic theory
and computer programming. My work continues to be both empirical, on spiders,
and theoretical, on the use of phylogeny in evolutionary inference.
Spider Systematics & Evolution
The family of jumping spiders (Salticidae)
includes more than 5000 species of varied body forms and habits. Their unique
high-resolution eyes
permit visually mediated predatory
and courtship
behaviour. Their best vertebrate analogs as predators are perhaps the
cats — sighting prey from a distance, stalking, and pouncing. In courtship
behavior, some groups such as Habronattus (above) rival the birds
of paradise in ornaments and behavioural complexity.
Phylogeny
of salticid spiders — The handful of systematists
who have worked on salticid phylogenetics over the last century have begun
to resolve the outlines of groups, but considerable work remains. A better
resolved phylogeny and the corresponding classification of subfamilies and
genera would facilitate efforts to discover new species and distinguish among
them, and would also open the group to phylogenetically-based studies of evolutionary
processes. A long term project of my laboratory is to reconstruct the phylogenetic
structure of the family using both molecular and morphological data. Recent sampling from South America, Asia, Africa and Australasia have yielded a reasonably complete outline of the phylogeny, but continued sampling
and data from more genes are needed to resolve the phylogeny more completely. Selected papers are:
-
Maddison, W., M. Bodner and K. Needham. 2008. Salticid spider phylogeny revisited, with the discovery of a large Australasian clade (Araneae: Salticidae). Zootaxa. 1893: 49–64.
-
Maddison, W.P., J.X. Zhang, & M.R. Bodner. 2007. A
basal phylogenetic placement for the salticid spider Eupoa, with descriptions
of two new species (Araneae: Salticidae). Zootaxa 1432: 23–33.
-
Maddison, W.P. and K. Needham. 2006. Lapsiines and hisponines
as phylogenetically basal salticid spiders (Araneae: Salticidae). Zootaxa.
1255:37-55.
-
Maddison, W. P. & M. Hedin. 2003. Jumping spider phylogeny
(Araneae: Salticidae). Invertebrate Systematics. 17: 529-549.
-
Hedin, M.C. and W.P. Maddison. 2001. A combined molecular
approach to phylogeny of the jumping spider subfamily Dendryphantinae (Araneae,
Salticidae). Molecular Phylogenetics and Evolution. 18: 386-403.
Biodiversity discovery: taxonomy
of salticid spiders — We have discovered only a small fraction of the species on Earth. The field of taxonomy continues the age of discovery by collecting and describing new species. I began contributing to this effort early in my career and continue through expeditions most recently to Ecuador, S.E. Asia, Gabon and Papua New Guinea. A public lecture describing an expedition and my perspective on biodiversity discovery can be found online. Selected papers are
Salticid evolution: biogeography, ecology — Our molecular phylogeny of salticids has revealed a surprisingly strong biogeographical signal: major clades are mostly restricted to a continental region. The New World tropics are dominated (in species count) by clades that are nearly absent from the Old World. Similarly, there are major clades largely restricted to Australasia, others to Afro-eurasia. Each of these clades shows a diversity of body forms, suggesting replicate ecological radiations have occurred independently on different continents. This provides an opportunity to study adaptive radiation and community assembly on a scale much larger (many hundreds of species and among continents) than well-known island examples such as Anolis lizards. Our first question will be whether consistency or contingency dominates: do faunas on different continents converge to the same constellation of "ecomorphs"?
-
Maddison, W., M. Bodner and K. Needham. 2008. Salticid spider phylogeny revisited, with the discovery of a large Australasian clade (Araneae: Salticidae). Zootaxa. 1893: 49–64.
-
Maddison, W. P. & M. Hedin. 2003. Jumping spider phylogeny
(Araneae: Salticidae). Invertebrate Systematics. 17: 529-549.
Evolution
and behaviour of Habronattus — One genus
of salticids, Habronattus,
has been a special focus of our work. The approximately 100 described species,
primarily North American, include many with complex courtship ornaments and
behaviours. A few are shown here. At the fine scale, we have examined the effect of sexual selection
on differentiation among isolated montane populations of H. pugillis.
At the broad scale, we have reconstructed phylogeny among species. Our eventual
goal is to use the phylogeny to answer questions of behavioural evolution
(e.g., why do alternating asymmetrical motions arise frequently? why are visual
signals synchronized to sound production?) and of chromosome evolution (e.g.,
what forces affect repeated evolution of X-autosomal fusions?). This project
is done in collaboration with Damian Elias (University of California, Berkeley) and Marshal Hedin (San Diego State University)
-
Elias, D.O., E.A. Hebets, R.R. Hoy, W.P. Maddison &
A.C. Mason. 2007. Regional song differences in sky-island populations of
the jumping spider Habronattus pugillis Griswold. Journal of Arachnology.
34 (3): 545-556.
-
Hebets, E.A. and W.P. Maddison. 2005. Xenophilic mating
preferences among populations of the jumping spider Habronattus pugillis
Griswold. Behavioural Ecology 16:981–988.
-
Maddison, W.P. and M.C. Hedin. 2003. Phylogeny of Habronattus
jumping spiders (Araneae: Salticidae), with consideration of genitalic and
courtship evolution. Systematic Entomology 28:1-21.
-
Masta, S. and W.P. Maddison. 2002. Sexual selection driving
diversification in jumping spiders. Proceedings of the National Academy
of Sciences of the United States of America 99(7):4442-4447.
-
Maddison, W.P. and M.M. McMahon. 2000. Divergence and reticulation
among montane populations of the jumping spider Habronattus pugillis
Griswold. Systematic Biology 49:400-421.
-
Maddison, W.P. and G.E. Stratton. 1988. Sound production
and associated morphology in male jumping spiders of the Habronattus
agilis species group (Araneae: Salticidae). J. Arachnology 16: 199-211.
- Maddison, W.P. 1982. XXXY sex chromosomes in males of the jumping spider
genus Pellenes (Araneae: Salticidae). Chromosoma (Berlin) 85: 23-37.
Other spider projects
Phylogenetic theory & programming
Phylogeny, the broad-scale genetic history of life, is a central historical
framework by which we can make intepretations about evolutionary processes.
Repeated patterns of change among species can suggest underlying evolutionary
forces and constraints. Abundant sequence data has allowed the historical approach
to be brought to finer scale work examining genealogical history of individual
gene loci within or among populations.
Character
evolution— I have long been interested in how knowledge
of phylogeny can be used to infer the ancestral states of characters and correlations
among characters. Selected papers are:
- Maddison,
W.P. 2006. Confounding asymmetries in evolutionary diversification and character
change. Evolution 60: 1743-1746.
- Maddison, W.P. 2000. Testing character correlation using pairwise comparisons
on a phylogeny. Journal of Theoretical Biology. 202: 195-204.
- Maddison, W.P. 1995. Calculating the probability distributions of ancestral
states reconstructed by parsimony on phylogenetic trees. Systematic Biology.
44:474-481.
- Maddison, W.P. 1991. Squared-change parsimony reconstructions of ancestral
states for continuous-valued characters on a phylogenetic tree. Systematic
Zoology. 40: 304-314.
- Maddison, W.P. 1990. A method for testing the correlated evolution of two
binary characters: are gains or losses concentrated on certain branches of
a phylogenetic tree?. Evolution 44: 539-557.
- Maddison, W.P., M.J. Donoghue and D.R. Maddison. 1984. Outgroup analysis
and parsimony. Syst. Zool. 33: 83-103.
Diversification—
A relatively new interest is in methods to understand speciation and extinction
using phylogeny.
- FitzJohn, R.G., W.P. Maddison & S.P. Otto. In press. Estimating trait-dependent speciation and extinction rates from incomplete phylogenies. Systematic Biology.
- Maddison, W.P., P.E. Midford & S.P. Otto. 2007. Estimating a binary
character's effect on speciation and extinction. Systematic Biology. 56:701-710
- Maddison, W.P. 2006. Confounding asymmetries in evolutionary diversification
and character change. Evolution 60: 1743-1746.
- Agnarsson, I., L. Avilés, J.A. Coddington and W.P.Maddison. 2006.
Sociality in theridiid spiders — Repeated origins of an evolutionary
dead-end. Evolution. 60: 2342-2351.
Phylogeography—
I have been curious about the "ultrastructure" of species phylogenies,
the histories of individual gene loci. This has led to several works on phylogeography
and population genetics.
- Maddison, W.P. and L.L. Knowles. 2006. Inferring phylogeny despite incomplete
lineage sorting. Systematic Biology. 55(1):21–30.
- Knowles, L.L. and W.P. Maddison. 2002. Statistical phylogeography. Molecular
Ecology. 11:2623-2635.
- Maddison, W.P. 1997. Gene trees in species trees. Systematic Biology 46:523-536.
- Maddison, W.P. 1995. Phylogenetic histories within and among species. In:
Experimental and molecular approaches to plant biosystematics (Hoch, P. C.,
and A. G. Stevenson, editors). Monographs in Systematics. Missouri Botanical
Garden, St. Louis. 53: 273-287. [pdf]
- Slatkin, M. and W. P. Maddison. 1989. A cladistic measure of gene flow inferred
from the phylogeny of alleles. Genetics 123: 603-613.
Computation and informatics
— Theoretical work introducing new methods is not fully available to the
biological community until delivered as tools. In some cases, however, tools
go far beyond simply completing basic calculations. Visualizations and exploratory
data analysis tools can provoke imaginations and help shape the very concepts
of the field. These principles have guided the the first three of the following
projects, done in collaboration with David Maddison.
- Mesquite project
— an open-source project, actively in development. Its goal is to stimulate
novel evolutionary analyses by permitting easy building and combining of modules.
Its analyses include ancestral state reconstruction with parsimony and likelihood,
tests of character correlation, diversification models, tree simulations and
comparisons, morphometrics, and coalescence modelling.
- MacClade — a widely-used
program for exploring phylogenetic trees interactively. Recent versions have
sophisticated DNA sequence editing capabilities.
- Tree of Life web project —
a collaborative presentation of Life's phylogeny. Described here: Maddison, D.R., K. Schulz, & W.P. Maddison. 2007. The Tree of Life Web Project. Zootaxa. 1168: 19-40
- CIPRes - Ciber-infrastructure
for phylogenetic research. A large multi-institution collaboration between
computer science and biology to enhance computational resources for phylogenetic
analyses.
Other phylogenetic projects — Art is not entirely absent from my phylogenetic
pursuits, as in the case of phylogenetic inversions.
The following are writings making general commentary on phylogenetic biology.
The MacClade book has several chapters that amount to a partial review of phylogenetics
as a field.
- Mooers, A.Ø., D.P. Faith and W.P.Maddison. 2008. Converting endangered species categories to probabilities of extinction for phylogenetic conservation prioritization. PLoS ONE 3(11): e3700.
- Maddison, W. and T.M. Pérez. 2001. Biodiversidad y lecciones de la historia.
In: Enfoques contemporáneos para el estudio de la biodiversidad (Hernández,
H.M., A. García Aldrete, F. Álvarez and M. Ulloa, editors). Instituto de Biología,
UNAM, Mexico. Pp. 201-220. [pdf]
- Maddison, W.P. 1996. Molecular approaches and the growth of phylogenetic
biology. In: Molecular zoology: Advances, strategies, and protocols (J.D.
Ferraris and S.R. Palumbi, eds.). Pages 4763. Wiley-Liss, New York. [pdf]
- Maddison, W.P. and D.R. Maddison. 1992. MacClade version 3: Analysis of
phylogeny and character evolution. 398 pp (book) + 900K (computer program).
Sinauer Associates, Sunderland Massachusetts.
Publications
Papers
- Maddison, W.P. 1978. Bianor aemulus (Gertsch, 1934), new combination
(Araneae: Salticidae). Peckhamia 1: 76-77.
- Maddison, W.P. 1982. XXXY sex chromosomes in males of the jumping spider
genus Pellenes (Araneae: Salticidae). Chromosoma (Berlin) 85: 23-37.
- Thomson, J. D., W.P. Maddison, and R.C. Plowright. 1982. Behavior of bumble
bee pollinators of Aralia hispida Vent. (Araliaceae). Oecologia 54:
326-336.
- Maddison, W.P., M.J. Donoghue and D.R. Maddison. 1984. Outgroup analysis
and parsimony. Syst. Zool. 33: 83-103.
- Maddison, W.P. 1986. Distinguishing the jumping spiders Eris militaris
and Eris flava in North America (Araneae: Salticidae). Psyche 93:
141-150.
- Donoghue, M.J. and W.P. Maddison. 1986. Polarity assessment in phylogenetic
systematics: A response to Meacham. Taxon 35: 534-538.
- Maddison, W.P. 1987. Marchena and other jumping spiders with an
apparent leg-carapace stridulatory mechanism (Araneae: Salticidae: Heliophaninae
and Thiodininae). Bull. British Arach. Soc. 7:101-106. [pdf]
- Swofford, D.L. and W.P. Maddison. 1987. Reconstructing ancestral character
states under Wagner parsimony. Mathematical Biosciences 87: 199-229.
- Maddison, W.P. and G.E. Stratton. 1988. Sound production and associated
morphology in male jumping spiders of the Habronattus agilis species
group (Araneae: Salticidae). J. Arachnology 16: 199-211.
- Maddison, W.P. and G.E. Stratton. 1988. A common method of sound production
by courting jumping spiders (Araneae: Salticidae). J. Arachnology 16: 267-269.
- Slatkin, M. and W. P. Maddison. 1989. A cladistic measure of gene flow inferred
from the phylogeny of alleles. Genetics 123: 603-613.
- Maddison, W.P. and D.R. Maddison. 1989. Interactive analysis of phylogeny
and character evolution using the computer program MacClade. Folia Primatologica
53: 190-202.
- Maddison, W.P. 1989. Reconstructing character evolution on polytomous cladograms.
Cladistics 5: 365-377.
- Maddison, W.P. 1990. A method for testing the correlated evolution of two
binary characters: are gains or losses concentrated on certain branches of
a phylogenetic tree?. Evolution 44: 539-557.
- Maddison, W.P. and M. Slatkin. 1990. Parsimony reconstructions of ancestral
states do not depend on the relative distances between linearly-ordered characters.
Systematic Zoology 39: 175-178.
- Slatkin, M. and W. P. Maddison. 1990. Detecting isolation by distance using
phylogenies of genes. Genetics 126: 249-260.
- Slatkin, M. and W. P. Maddison. 1991. Review of "Genetic data analysis:
Methods for discrete population genetic data" by B. S. Weir. Systematic Zoology
40: 248-249.
- Maddison, W.P. and M. Slatkin. 1991. Null models for the number of evolutionary
steps in a character on a phylogenetic tree. Evolution 45: 1184-1197.
- Avilés, L. and W.P. Maddison. 1991. When is the sex ratio biased in social
spiders?: Chromosome studies of embryos and male meiosis in Anelosimus
species (Araneae: Theridiidae). J. Arachnology 19: 126-135.
- Maddison, W.P. 1991. Squared-change parsimony reconstructions of ancestral
states for continuous-valued characters on a phylogenetic tree. Systematic
Zoology. 40: 304-314.
- Hudson, R., M. Slatkin, and W.P. Maddison. 1992. Estimation of levels of
gene flow from DNA sequence data. Genetics. 132: 583-589.
- Swofford, D.L. and W.P. Maddison. 1992. Parsimony, character-state reconstructions,
and evolutionary inferences. In: Systematics, Historical Ecology, and North
American Freshwater Fishes (R. L. Mayden, ed.). Stanford University Press,
Stanford, California. Pages 187 - 223.
- Maddison, W.P. 1993. Missing data versus missing characters in phylogenetic
analysis. Systematic Biology. 42: 576-581.
- Clark, J.B., W.P. Maddison, and M.G. Kidwell. 1994. Phylogenetic analyis
supports horizontal transfer of P-transposable elements. Mol. Biol. Evol.
11: 40-50.
- Maddison, W.P. 1995. Phylogenetic histories within and among species. In:
Experimental and molecular approaches to plant biosystematics (Hoch, P. C.,
and A. G. Stevenson, editors). Monographs in Systematics. Missouri Botanical
Garden, St. Louis. 53: 273-287. [pdf]
- Maddison, W.P. 1995. Calculating the probability distributions of ancestral
states reconstructed by parsimony on phylogenetic trees. Systematic Biology.
44:474-481.
- Maddison, W.P. 1996. Pelegrina and other jumping spiders formerly
placed in the genus Metaphidippus (Araneae: Salticidae). Bulletin of the Museum
of Comparative Zoology. 154(4): 215-368.
- Maddison, W.P. 1996. Molecular approaches and the growth of phylogenetic
biology. In: Molecular zoology: Advances, strategies, and protocols (J.D.
Ferraris and S.R. Palumbi, eds.). Pages 4763. Wiley-Liss, New York. [pdf]
- Maddison, W.P. 1997. Gene trees in species trees. Systematic Biology 46:523-536.
- Maddison, D.R., D.L. Swofford, and W.P. Maddison. 1997. NEXUS: An extensible
file format for systematic information. Systematic Biology 46: 590-621.
- Maddison, W.P. 2000. Testing character correlation using pairwise comparisons
on a phylogeny. Journal of Theoretical Biology. 202: 195-204.
- Maddison, W.P. and M.M. McMahon. 2000. Divergence and reticulation among
montane populations of the jumping spider Habronattus pugillis Griswold. Systematic
Biology 49:400-421.
- Maddison, W. and T.M. Pérez. 2001. Biodiversidad y lecciones de la historia.
In: Enfoques contemporáneos para el estudio de la biodiversidad (Hernández,
H.M., A. García Aldrete, F. Álvarez and M. Ulloa, editors). Instituto de Biología,
UNAM, Mexico. Pp. 201-220. [pdf]
- Hedin, M.C. and W.P. Maddison. 2001. A combined molecular approach to phylogeny
of the jumping spider subfamily Dendryphantinae (Araneae, Salticidae). Molecular
Phylogenetics and Evolution. 18: 386-403.
- Avilés, L., W. Maddison, P. Salazar, G. Estévez, P. Tufiño and G. Cañas.
2001. Arañas sociales de la Amazonía ecuatoriana, con notas sobre seis especies
sociales no descritas previamente. [Social spiders of the Ecuadorian Amazonia,
with notes on previously undescribed social species.] Rev. Chil. Hist. Nat.,
74:619-638.
- Hedin, M. and W.P. Maddison. 2001. Phylogenetic utility and evidence for
multiple copies of elongation factor 1alpha in the spider genus Habronattus
(Araneae: Salticidae). Mol. Biol. Evol. 18(8): 1512-1521
- Masta, S. and W.P. Maddison. 2002. Sexual selection driving diversification
in jumping spiders. Proceedings of the National Academy of Sciences of the
United States of America 99(7):4442-4447.
- Knowles, L.L. and W.P. Maddison. 2002. Statistical phylogeography. Molecular
Ecology. 11:2623-2635.
- Maddison, W.P. and M.C. Hedin. 2003. Phylogeny of Habronattus jumping
spiders (Araneae: Salticidae), with consideration of genitalic and courtship
evolution. Systematic Entomology 28:1-21.
- Maddison, W.P. and M.C. Hedin. 2003. Jumping spider phylogeny (Araneae:
Salticidae). Invertebrate Systematics. 17: 529-549.
- Damian O. Elias, D. O., A. C. Mason, W. P. Maddison, and R. R. Hoy. 2003.
Seismic signals in a courting male jumping spider (Araneae: Salticidae). Journal
of Experimental Biology. 206: 4029-4039.
- Hebets, E.A. and W.P. Maddison. 2005. Xenophilic mating preferences among
populations of the jumping spider Habronattus pugillis Griswold.
Behavioural Ecology 16:981988.
- Maddison, W.P. and L.L. Knowles. 2006. Inferring phylogeny despite incomplete
lineage sorting. Systematic Biology. 55(1):2130.
- Maddison, W.P. 2006. New lapsiine jumping spiders from Ecuador (Araneae:
Salticidae). Zootaxa. 1255:17-28.
- Maddison, W.P. and J.X. Zhang. 2006. New lyssomanine and hisponine jumping
spiders from Africa (Araneae: Salticidae). Zootaxa. 1255:29-35.
- Maddison, W.P. and K. Needham. 2006. Lapsiines and hisponines as phylogenetically
basal salticid spiders (Araneae: Salticidae). Zootaxa. 1255:37-55.
- Currat, M., L. Excoffier, W. Maddison, S.P. Otto, N. Ray, M.C. Whitlock,
S. Yeaman. 2006. Comment on "Ongoing Adaptive Evolution of ASPM, a Brain Size
Determinant in Homo sapiens" and "Microcephalin, a Gene Regulating Brain Size,
Continues to Evolve Adaptively in Humans". Science 313:172a
- Maddison, W.P. 2006. Confounding asymmetries in evolutionary diversification
and character change. Evolution 60: 1743-1746.
- Avilés, L., W.P. Maddison, and I. Agnarsson. 2006. A new independently-derived
social spider with explosive colony proliferation and a female size dimorphism.
Biotropica 38: 743-753.
- Agnarsson, I., L. Avilés, J.A. Coddington and W.P.Maddison. 2006. Sociality
in theridiid spiders — Repeated origins of an evolutionary dead-end. Evolution.
60: 2342-2351
- Maddison, W.P., J.X. Zhang, & M.R. Bodner. 2007. A basal phylogenetic placement
for the salticid spider Eupoa, with descriptions of two new species
(Araneae: Salticidae). Zootaxa 1432: 2333.
- Ramírez, M.J., J.A. Coddington, W.P. Maddison, P.E. Midford, L. Prendini,
J. Miller, C.E. Griswold, G. Hormiga, P. Sierwald, N. Scharff, S.P. Benjamin,
& W.C. Wheeler. 2007. Linking of digital Images to phylogenetic data matrices
using a morphological ontology. Systematic Biology. 56:283294
- Elias, D.O., E.A. Hebets, R.R. Hoy, W.P. Maddison & A.C. Mason. 2007. Regional
song differences in sky-island populations of the jumping spider Habronattus
pugillis Griswold. Journal of Arachnology. 34 (3): 545-556.
- Maddison, W.P., P.E. Midford & S.P. Otto. 2007. Estimating a binary character's
effect on speciation and extinction. Systematic Biology. 56:701-710.
- Agnarsson, I., W.P. Maddison, and L. Avilés. 2007. The phylogeny of the
social Anelosimus spiders (Araneae: Theridiidae) inferred from six
molecular loci and morphology. Molecular Phylogenetics and Evolution. 43:
833-851.
- Maddison, D.R., K. Schulz, & W.P. Maddison. 2007. The Tree of Life Web Project. Zootaxa. 1168: 19-40.
- Vink, C.J., M.C. Hedin, M.R. Bodner, W.P.Maddison, Cheryl Y. Hayashi & J.E. Garb. 2008. Actin 5C, a promising nuclear gene for spider phylogenetics. Molecular Phylogenetics and Evolution. 48: 377–382.
- Maddison, W., M. Bodner and K. Needham. 2008. Salticid spider phylogeny revisited, with the discovery of a large Australasian clade (Araneae: Salticidae). Zootaxa. 1893: 49–64.
- Mooers, A.Ø., D.P. Faith and W.P.Maddison. 2008. Converting endangered species categories to probabilities of extinction for phylogenetic conservation prioritization. PLoS ONE 3(11): e3700.
- Muster, C., W.P. Maddison, S. Uhlmann, T.U. Berendonk, & A.P. Vogler. 2009. Arctic-Alpine Distributions—Metapopulations on a Continental Scale? American Naturalist 173: 313–326
- Maddison, W.P. 2009. New cocalodine jumping spiders from Papua New Guinea (Araneae: Salticidae: Cocalodinae). Zootaxa. 2021: 1–22.
- FitzJohn, R.G., W.P. Maddison & S.P. Otto. In press. Estimating trait-dependent speciation and extinction rates from incomplete phylogenies. Systematic Biology.
Computer Programs
- Maddison, W.P. 1986. MacClade version 1.0 (An interactive computer program
for reconstructing phylogeny and analyzing character evolution, distributed
by the author; reviewed by W.L. Fink, Science 234: 1135-1139, 28 November
1986).
- Maddison, W.P. and D.R. Maddison. 1987. MacClade version 2.1 (Grand Prize
Winner of Apple Computer's Wheels for the Mind competition).
- Maddison, W.P. and D.R. Maddison. 1992. MacClade version 3: Analysis of
phylogeny and character evolution. 398 pp (book) + 900K (computer program).
Sinauer Associates, Sunderland Massachusetts.
- Maddison, D.R. and W.P. Maddison. 2000. MacClade version 4: Analysis of
phylogeny and character evolution. Sinauer Associates, Sunderland Massachusetts.
- Midford, P. E., T. Garland Jr. & W. Maddison. 2002. PDAP:PDTREE package
for Mesquite, version 1.00. http://mesquiteproject.org/pdap_mesquite
- Maddison, W.P. and D.R. Maddison. 2003. Mesquite: A modular system for evolutionary
analysis. version 1.0. http://mesquiteproject.org
- Dyreson, E. and W.P. Maddison. 2003. Rhetenor package for morphometrics
for the Mesquite system. version 1.0. http://mesquiteproject.org
- Maddison, D.R. and W.P. Maddison. 2003. Genesis: models of character evolution.
A package of modules for Mesquite. version 1.0. http://mesquiteproject.org
- Maddison, W.P. and D.R. Maddison. 2004-2006. Mesquite: A modular system
for evolutionary analysis. versions 1.01-1.12. http://mesquiteproject.org.
(Over 100,000 lines of programming code in 450 modules.)
- Midford, P. and W.P. Maddison. 2006. Correl package for Mesquite. version
1.1. http://mesquiteproject.org.
- Maddison, D.R. and W.P. Maddison. 2006. Cartographer package for Mesquite.
version 1.0. http://mesquiteproject.org.
- Maddison, D.R., T. Wheeler and W.P. Maddison. 2006. Align package for Mesquite.
version 1.0. http://mesquiteproject.org.
- Maddison, W.P. and D.R. Maddison. 2007. Mesquite: A modular system for evolutionary
analysis. version 2.0. http://mesquiteproject.org.
- Maddison, W.P. and M.Ramírez. 2007. SILK: Simple Image LinKing Package for
Mesquite. version 1.0. http://mesquiteproject.org/packages/SILK.
- Midford, P. and W.P. Maddison. 2007. Diverse Package for Mesquite. Version
1.0. http://mesquiteproject.org
- Maddison, W.P. and A.Ø.Mooers. 2007. Tuatara: Conservation priority in a phylogenetic context. version 1.0. http://mesquiteproject.org/packages/Tuatara
- Maddison, W.P. and D.R. Maddison. 2008. Mesquite: A modular system for evolutionary analysis. version 2.5. http://mesquiteproject.org. (661 modules)
- Maddison, W.P. and D.R. Maddison. 2009. Mesquite: A modular system for evolutionary analysis. version 2.6. http://mesquiteproject.org. (686 modules)
- Maddison, W.P. and D.R. Maddison. 2009. Mesquite: A modular system for evolutionary analysis. version 2.7. http://mesquiteproject.org. (694 modules)
Copyright © 2003-2009 W. Maddison